J6_4V6O_001
3D structure
- PDB id
- 4V6O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 14.7 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 4V6O|1|BB|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V6O|1|BB|G|45
4V6O|1|BB|G|46
*
4V6O|1|BB|C|179
4V6O|1|BB|G|180
4V6O|1|BB|A|181
4V6O|1|BB|A|182
4V6O|1|BB|C|183
*
4V6O|1|BB|G|214
4V6O|1|BB|G|215
4V6O|1|BB|A|216
4V6O|1|BB|A|217
4V6O|1|BB|A|218
4V6O|1|BB|A|219
4V6O|1|BB|G|220
4V6O|1|BB|A|221
4V6O|1|BB|A|222
4V6O|1|BB|A|223
4V6O|1|BB|U|224
*
4V6O|1|BB|A|231
4V6O|1|BB|G|232
4V6O|1|BB|A|233
4V6O|1|BB|U|234
4V6O|1|BB|U|235
*
4V6O|1|BB|A|262
4V6O|1|BB|G|263
4V6O|1|BB|C|264
4V6O|1|BB|A|265
4V6O|1|BB|G|266
*
4V6O|1|BB|C|426
4V6O|1|BB|U|427
4V6O|1|BB|A|428
4V6O|1|BB|A|429
4V6O|1|BB|A|430
4V6O|1|BB|U|431
4V6O|1|BB|A|432
4V6O|1|BB|C|433
Current chains
- Chain BB
- 23S ribomosomal RNA
Nearby chains
- Chain B5
- 50S ribosomal protein L34
- Chain BI
- 50S ribosomal protein L9
Coloring options: