J6_4V6Y_001

3D structure

PDB id

4V6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

4V6Y|1|BA|A|223, 4V6Y|1|BA|A|265

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6Y|1|BA|G|45
4V6Y|1|BA|G|46
*
4V6Y|1|BA|C|179
4V6Y|1|BA|G|180
4V6Y|1|BA|A|181
4V6Y|1|BA|A|182
4V6Y|1|BA|C|183
*
4V6Y|1|BA|G|214
4V6Y|1|BA|G|215
4V6Y|1|BA|A|216
4V6Y|1|BA|A|217
4V6Y|1|BA|A|218
4V6Y|1|BA|A|219
4V6Y|1|BA|G|220
4V6Y|1|BA|A|221
4V6Y|1|BA|A|222
4V6Y|1|BA|A|223
4V6Y|1|BA|U|224
*
4V6Y|1|BA|A|231
4V6Y|1|BA|G|232
4V6Y|1|BA|A|233
4V6Y|1|BA|U|234
4V6Y|1|BA|U|235
*
4V6Y|1|BA|A|262
4V6Y|1|BA|G|263
4V6Y|1|BA|C|264
4V6Y|1|BA|A|265
4V6Y|1|BA|G|266
*
4V6Y|1|BA|C|426
4V6Y|1|BA|U|427
4V6Y|1|BA|A|428
4V6Y|1|BA|A|429
4V6Y|1|BA|A|430
4V6Y|1|BA|U|431
4V6Y|1|BA|A|432
4V6Y|1|BA|C|433

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L32