3D structure

PDB id
4V72 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)
Experimental method
ELECTRON MICROSCOPY
Resolution
13 Å

Loop

Sequence
UUUA*UUUG*CU*AGCA*UCAUAGUGAUCC*GCUCAACGGAUAAAA
Length
41 nucleotides
Bulged bases
4V72|1|BA|U|2076, 4V72|1|BA|A|2388, 4V72|1|BA|G|2428, 4V72|1|BA|A|2430
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V72|1|BA|U|2074
4V72|1|BA|U|2075
4V72|1|BA|U|2076
4V72|1|BA|A|2077
*
4V72|1|BA|U|2243
4V72|1|BA|U|2244
4V72|1|BA|U|2245
4V72|1|BA|G|2246
*
4V72|1|BA|C|2258
4V72|1|BA|U|2259
*
4V72|1|BA|A|2281
4V72|1|BA|G|2282
4V72|1|BA|C|2283
4V72|1|BA|A|2284
*
4V72|1|BA|U|2384
4V72|1|BA|C|2385
4V72|1|BA|A|2386
4V72|1|BA|U|2387
4V72|1|BA|A|2388
4V72|1|BA|G|2389
4V72|1|BA|U|2390
4V72|1|BA|G|2391
4V72|1|BA|A|2392
4V72|1|BA|U|2393
4V72|1|BA|C|2394
4V72|1|BA|C|2395
*
4V72|1|BA|G|2421
4V72|1|BA|C|2422
4V72|1|BA|U|2423
4V72|1|BA|C|2424
4V72|1|BA|A|2425
4V72|1|BA|A|2426
4V72|1|BA|C|2427
4V72|1|BA|G|2428
4V72|1|BA|G|2429
4V72|1|BA|A|2430
4V72|1|BA|U|2431
4V72|1|BA|A|2432
4V72|1|BA|A|2433
4V72|1|BA|A|2434
4V72|1|BA|A|2435

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain A3
Transfer RNA; tRNA
Chain B1
50S ribosomal protein L33
Chain B3
50S ribosomal protein L35
Chain BC
50S ribosomal protein L2
Chain BL
50S ribosomal protein L15
Chain BW
50S ribosomal protein L27
Chain BX
50S ribosomal protein L28

Coloring options:

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