J6_4V78_001

3D structure

PDB id

4V78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

4V78|1|BA|A|223, 4V78|1|BA|A|265

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V78|1|BA|G|45
4V78|1|BA|G|46
*
4V78|1|BA|C|179
4V78|1|BA|G|180
4V78|1|BA|A|181
4V78|1|BA|A|182
4V78|1|BA|C|183
*
4V78|1|BA|G|214
4V78|1|BA|G|215
4V78|1|BA|A|216
4V78|1|BA|A|217
4V78|1|BA|A|218
4V78|1|BA|A|219
4V78|1|BA|G|220
4V78|1|BA|A|221
4V78|1|BA|A|222
4V78|1|BA|A|223
4V78|1|BA|U|224
*
4V78|1|BA|A|231
4V78|1|BA|G|232
4V78|1|BA|A|233
4V78|1|BA|U|234
4V78|1|BA|U|235
*
4V78|1|BA|A|262
4V78|1|BA|G|263
4V78|1|BA|C|264
4V78|1|BA|A|265
4V78|1|BA|G|266
*
4V78|1|BA|C|426
4V78|1|BA|U|427
4V78|1|BA|A|428
4V78|1|BA|A|429
4V78|1|BA|A|430
4V78|1|BA|U|431
4V78|1|BA|A|432
4V78|1|BA|C|433

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L34