J6_4V79_002

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

UUUA*UUUG*CU*AGCA*UCAUAGUGAUCC*GCUCAACGGAUAAAA

Length

41 nucleotides

Bulged bases

4V79|1|BA|U|2076, 4V79|1|BA|U|2245, 4V79|1|BA|A|2388, 4V79|1|BA|U|2423, 4V79|1|BA|G|2428, 4V79|1|BA|A|2430, 4V79|1|BA|U|2431

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V79|1|BA|U|2074
4V79|1|BA|U|2075
4V79|1|BA|U|2076
4V79|1|BA|A|2077
*
4V79|1|BA|U|2243
4V79|1|BA|U|2244
4V79|1|BA|U|2245
4V79|1|BA|G|2246
*
4V79|1|BA|C|2258
4V79|1|BA|U|2259
*
4V79|1|BA|A|2281
4V79|1|BA|G|2282
4V79|1|BA|C|2283
4V79|1|BA|A|2284
*
4V79|1|BA|U|2384
4V79|1|BA|C|2385
4V79|1|BA|A|2386
4V79|1|BA|U|2387
4V79|1|BA|A|2388
4V79|1|BA|G|2389
4V79|1|BA|U|2390
4V79|1|BA|G|2391
4V79|1|BA|A|2392
4V79|1|BA|U|2393
4V79|1|BA|C|2394
4V79|1|BA|C|2395
*
4V79|1|BA|G|2421
4V79|1|BA|C|2422
4V79|1|BA|U|2423
4V79|1|BA|C|2424
4V79|1|BA|A|2425
4V79|1|BA|A|2426
4V79|1|BA|C|2427
4V79|1|BA|G|2428
4V79|1|BA|G|2429
4V79|1|BA|A|2430
4V79|1|BA|U|2431
4V79|1|BA|A|2432
4V79|1|BA|A|2433
4V79|1|BA|A|2434
4V79|1|BA|A|2435

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B1

50S ribosomal protein L33

Chain B3

50S ribosomal protein L35

Chain BC

50S ribosomal protein L2

Chain BL

50S ribosomal protein L15

Chain BW

50S ribosomal protein L27