J6_4V7A_002

3D structure

PDB id

4V7A (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

UUUA*UUUG*CU*AGCA*UCAUAGUGAUCCG*CGCUCAACGGAUAAAA

Length

43 nucleotides

Bulged bases

4V7A|1|BA|U|2076, 4V7A|1|BA|A|2388, 4V7A|1|BA|U|2390, 4V7A|1|BA|U|2423, 4V7A|1|BA|G|2428, 4V7A|1|BA|A|2430, 4V7A|1|BA|U|2431, 4V7A|1|BA|A|2432, 4V7A|1|BA|A|2433

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7A|1|BA|U|2074
4V7A|1|BA|U|2075
4V7A|1|BA|U|2076
4V7A|1|BA|A|2077
*
4V7A|1|BA|U|2243
4V7A|1|BA|U|2244
4V7A|1|BA|U|2245
4V7A|1|BA|G|2246
*
4V7A|1|BA|C|2258
4V7A|1|BA|U|2259
*
4V7A|1|BA|A|2281
4V7A|1|BA|G|2282
4V7A|1|BA|C|2283
4V7A|1|BA|A|2284
*
4V7A|1|BA|U|2384
4V7A|1|BA|C|2385
4V7A|1|BA|A|2386
4V7A|1|BA|U|2387
4V7A|1|BA|A|2388
4V7A|1|BA|G|2389
4V7A|1|BA|U|2390
4V7A|1|BA|G|2391
4V7A|1|BA|A|2392
4V7A|1|BA|U|2393
4V7A|1|BA|C|2394
4V7A|1|BA|C|2395
4V7A|1|BA|G|2396
*
4V7A|1|BA|C|2420
4V7A|1|BA|G|2421
4V7A|1|BA|C|2422
4V7A|1|BA|U|2423
4V7A|1|BA|C|2424
4V7A|1|BA|A|2425
4V7A|1|BA|A|2426
4V7A|1|BA|C|2427
4V7A|1|BA|G|2428
4V7A|1|BA|G|2429
4V7A|1|BA|A|2430
4V7A|1|BA|U|2431
4V7A|1|BA|A|2432
4V7A|1|BA|A|2433
4V7A|1|BA|A|2434
4V7A|1|BA|A|2435

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B1

50S ribosomal protein L33

Chain B3

50S ribosomal protein L35

Chain BC

50S ribosomal protein L2

Chain BL

50S ribosomal protein L15

Chain BW

50S ribosomal protein L27

Chain BX

50S ribosomal protein L28