J6_4V7I_001

3D structure

PDB id

4V7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome-SecY complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.6 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

4V7I|1|A8|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7I|1|A8|G|45
4V7I|1|A8|G|46
*
4V7I|1|A8|C|179
4V7I|1|A8|G|180
4V7I|1|A8|A|181
4V7I|1|A8|A|182
4V7I|1|A8|C|183
*
4V7I|1|A8|G|214
4V7I|1|A8|G|215
4V7I|1|A8|A|216
4V7I|1|A8|A|217
4V7I|1|A8|A|218
4V7I|1|A8|A|219
4V7I|1|A8|G|220
4V7I|1|A8|A|221
4V7I|1|A8|A|222
4V7I|1|A8|A|223
4V7I|1|A8|U|224
*
4V7I|1|A8|A|231
4V7I|1|A8|G|232
4V7I|1|A8|A|233
4V7I|1|A8|U|234
4V7I|1|A8|U|235
*
4V7I|1|A8|A|262
4V7I|1|A8|G|263
4V7I|1|A8|C|264
4V7I|1|A8|A|265
4V7I|1|A8|G|266
*
4V7I|1|A8|C|426
4V7I|1|A8|U|427
4V7I|1|A8|A|428
4V7I|1|A8|A|429
4V7I|1|A8|A|430
4V7I|1|A8|U|431
4V7I|1|A8|A|432
4V7I|1|A8|C|433

Current chains

Chain A8

23S ribosomal RNA

Nearby chains

Chain A2

50S ribosomal protein L34