J6_4V7J_001

3D structure

PDB id

4V7J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelE nuclease bound to the 70S ribosome (precleavage state)

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V7J|1|AA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7J|1|AA|G|44
4V7J|1|AA|C|45
*
4V7J|1|AA|G|179
4V7J|1|AA|G|180
4V7J|1|AA|A|181
4V7J|1|AA|A|182
4V7J|1|AA|C|183
*
4V7J|1|AA|G|214
4V7J|1|AA|G|215
4V7J|1|AA|A|216
4V7J|1|AA|G|217
4V7J|1|AA|A|218
4V7J|1|AA|G|219
4V7J|1|AA|G|220
4V7J|1|AA|A|221
4V7J|1|AA|A|222
4V7J|1|AA|A|223
4V7J|1|AA|G|224
*
4V7J|1|AA|C|231
4V7J|1|AA|G|232
4V7J|1|AA|A|233
4V7J|1|AA|C|234
4V7J|1|AA|U|235
*
4V7J|1|AA|A|262
4V7J|1|AA|C|263
4V7J|1|AA|C|264
4V7J|1|AA|A|265
4V7J|1|AA|G|266
*
4V7J|1|AA|C|426
4V7J|1|AA|U|427
4V7J|1|AA|A|428
4V7J|1|AA|A|429
4V7J|1|AA|G|430
4V7J|1|AA|U|431
4V7J|1|AA|A|432
4V7J|1|AA|C|433

Current chains

Chain AA

RNA (2848-MER)

Nearby chains

Chain A7

50S ribosomal protein L34