J6_4V7M_003

3D structure

PDB id

4V7M (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of Capreomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V7M|1|DA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7M|1|DA|G|44
4V7M|1|DA|C|45
*
4V7M|1|DA|G|179
4V7M|1|DA|G|180
4V7M|1|DA|A|181
4V7M|1|DA|A|182
4V7M|1|DA|C|183
*
4V7M|1|DA|G|214
4V7M|1|DA|G|215
4V7M|1|DA|A|216
4V7M|1|DA|G|217
4V7M|1|DA|A|218
4V7M|1|DA|G|219
4V7M|1|DA|G|220
4V7M|1|DA|A|221
4V7M|1|DA|A|222
4V7M|1|DA|A|223
4V7M|1|DA|G|224
*
4V7M|1|DA|C|231
4V7M|1|DA|G|232
4V7M|1|DA|A|233
4V7M|1|DA|C|234
4V7M|1|DA|U|235
*
4V7M|1|DA|A|262
4V7M|1|DA|C|263
4V7M|1|DA|C|264
4V7M|1|DA|A|265
4V7M|1|DA|G|266
*
4V7M|1|DA|C|426
4V7M|1|DA|U|427
4V7M|1|DA|A|428
4V7M|1|DA|A|429
4V7M|1|DA|G|430
4V7M|1|DA|U|431
4V7M|1|DA|A|432
4V7M|1|DA|C|433

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D7

50S ribosomal protein L34