J6_4V8E_001

3D structure

PDB id

4V8E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V8E|1|AA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8E|1|AA|G|45
4V8E|1|AA|C|46
*
4V8E|1|AA|G|179
4V8E|1|AA|G|180
4V8E|1|AA|A|181
4V8E|1|AA|A|182
4V8E|1|AA|C|183
*
4V8E|1|AA|G|214
4V8E|1|AA|G|215
4V8E|1|AA|A|216
4V8E|1|AA|G|217
4V8E|1|AA|A|218
4V8E|1|AA|G|219
4V8E|1|AA|G|220
4V8E|1|AA|A|221
4V8E|1|AA|A|222
4V8E|1|AA|A|223
4V8E|1|AA|G|224
*
4V8E|1|AA|C|231
4V8E|1|AA|G|232
4V8E|1|AA|A|233
4V8E|1|AA|C|234
4V8E|1|AA|U|235
*
4V8E|1|AA|A|262
4V8E|1|AA|C|263
4V8E|1|AA|C|264
4V8E|1|AA|A|265
4V8E|1|AA|G|266
*
4V8E|1|AA|C|426
4V8E|1|AA|U|427
4V8E|1|AA|A|428
4V8E|1|AA|A|429
4V8E|1|AA|G|430
4V8E|1|AA|U|431
4V8E|1|AA|A|432
4V8E|1|AA|C|433

Current chains

Chain AA

RNA (2912-MER)

Nearby chains

Chain A7

50S ribosomal protein L34