J6_4V8E_003
3D structure
- PDB id
- 4V8E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC
- Length
- 36 nucleotides
- Bulged bases
- 4V8E|1|CA|A|213
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V8E|1|CA|G|44
4V8E|1|CA|C|45
*
4V8E|1|CA|G|169
4V8E|1|CA|G|170
4V8E|1|CA|A|171
4V8E|1|CA|A|172
4V8E|1|CA|C|173
*
4V8E|1|CA|G|204
4V8E|1|CA|G|205
4V8E|1|CA|A|206
4V8E|1|CA|G|207
4V8E|1|CA|A|208
4V8E|1|CA|G|209
4V8E|1|CA|G|210
4V8E|1|CA|A|211
4V8E|1|CA|A|212
4V8E|1|CA|A|213
4V8E|1|CA|G|214
*
4V8E|1|CA|C|221
4V8E|1|CA|G|222
4V8E|1|CA|A|223
4V8E|1|CA|C|224
4V8E|1|CA|U|225
*
4V8E|1|CA|A|252
4V8E|1|CA|C|253
4V8E|1|CA|C|254
4V8E|1|CA|A|255
4V8E|1|CA|G|256
*
4V8E|1|CA|C|454
4V8E|1|CA|U|455
4V8E|1|CA|A|456
4V8E|1|CA|A|457
4V8E|1|CA|G|458
4V8E|1|CA|U|459
4V8E|1|CA|A|460
4V8E|1|CA|C|461
Current chains
- Chain CA
- RNA (2912-MER)
Nearby chains
- Chain C7
- 50S ribosomal protein L34
Coloring options: