J6_4V8J_001

3D structure

PDB id

4V8J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G347U.

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V8J|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8J|1|BA|G|44
4V8J|1|BA|C|45
*
4V8J|1|BA|G|179
4V8J|1|BA|G|180
4V8J|1|BA|A|181
4V8J|1|BA|A|182
4V8J|1|BA|C|183
*
4V8J|1|BA|G|214
4V8J|1|BA|G|215
4V8J|1|BA|A|216
4V8J|1|BA|G|217
4V8J|1|BA|A|218
4V8J|1|BA|G|219
4V8J|1|BA|G|220
4V8J|1|BA|A|221
4V8J|1|BA|A|222
4V8J|1|BA|A|223
4V8J|1|BA|G|224
*
4V8J|1|BA|C|231
4V8J|1|BA|G|232
4V8J|1|BA|A|233
4V8J|1|BA|C|234
4V8J|1|BA|U|235
*
4V8J|1|BA|A|262
4V8J|1|BA|C|263
4V8J|1|BA|C|264
4V8J|1|BA|A|265
4V8J|1|BA|G|266
*
4V8J|1|BA|C|426
4V8J|1|BA|U|427
4V8J|1|BA|A|428
4V8J|1|BA|A|429
4V8J|1|BA|G|430
4V8J|1|BA|U|431
4V8J|1|BA|A|432
4V8J|1|BA|C|433

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B7

50S ribosomal protein L34