J6_4V9A_003

3D structure

PDB id

4V9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the 70S ribosome with tetracycline.

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V9A|1|DA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9A|1|DA|G|45
4V9A|1|DA|C|46
*
4V9A|1|DA|G|179
4V9A|1|DA|G|180
4V9A|1|DA|A|181
4V9A|1|DA|A|182
4V9A|1|DA|C|183
*
4V9A|1|DA|G|214
4V9A|1|DA|G|215
4V9A|1|DA|A|216
4V9A|1|DA|G|217
4V9A|1|DA|A|218
4V9A|1|DA|G|219
4V9A|1|DA|G|220
4V9A|1|DA|A|221
4V9A|1|DA|A|222
4V9A|1|DA|A|223
4V9A|1|DA|G|224
*
4V9A|1|DA|C|231
4V9A|1|DA|G|232
4V9A|1|DA|A|233
4V9A|1|DA|C|234
4V9A|1|DA|U|235
*
4V9A|1|DA|A|262
4V9A|1|DA|C|263
4V9A|1|DA|C|264
4V9A|1|DA|A|265
4V9A|1|DA|G|266
*
4V9A|1|DA|C|426
4V9A|1|DA|U|427
4V9A|1|DA|A|428
4V9A|1|DA|A|429
4V9A|1|DA|G|430
4V9A|1|DA|U|431
4V9A|1|DA|A|432
4V9A|1|DA|C|433

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D7

50S ribosomal protein L34