J6_4V9C_001

3D structure

PDB id

4V9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Allosteric control of the ribosome by small-molecule antibiotics

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUUC*GAGCAG*CUAAAUAC

Length

38 nucleotides

Bulged bases

4V9C|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9C|1|BA|G|45
4V9C|1|BA|G|46
*
4V9C|1|BA|C|179
4V9C|1|BA|G|180
4V9C|1|BA|A|181
4V9C|1|BA|A|182
4V9C|1|BA|C|183
*
4V9C|1|BA|G|214
4V9C|1|BA|G|215
4V9C|1|BA|A|216
4V9C|1|BA|A|217
4V9C|1|BA|A|218
4V9C|1|BA|A|219
4V9C|1|BA|G|220
4V9C|1|BA|A|221
4V9C|1|BA|A|222
4V9C|1|BA|A|223
4V9C|1|BA|U|224
*
4V9C|1|BA|A|231
4V9C|1|BA|G|232
4V9C|1|BA|A|233
4V9C|1|BA|U|234
4V9C|1|BA|U|235
4V9C|1|BA|C|236
*
4V9C|1|BA|G|261
4V9C|1|BA|A|262
4V9C|1|BA|G|263
4V9C|1|BA|C|264
4V9C|1|BA|A|265
4V9C|1|BA|G|266
*
4V9C|1|BA|C|426
4V9C|1|BA|U|427
4V9C|1|BA|A|428
4V9C|1|BA|A|429
4V9C|1|BA|A|430
4V9C|1|BA|U|431
4V9C|1|BA|A|432
4V9C|1|BA|C|433

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L34