J6_4W29_001

3D structure

PDB id

4W29 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4W29|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W29|1|BA|G|45
4W29|1|BA|C|46
*
4W29|1|BA|G|179
4W29|1|BA|G|180
4W29|1|BA|A|181
4W29|1|BA|A|182
4W29|1|BA|C|183
*
4W29|1|BA|G|214
4W29|1|BA|G|215
4W29|1|BA|A|216
4W29|1|BA|G|217
4W29|1|BA|A|218
4W29|1|BA|G|219
4W29|1|BA|G|220
4W29|1|BA|A|221
4W29|1|BA|A|222
4W29|1|BA|A|223
4W29|1|BA|G|224
*
4W29|1|BA|C|231
4W29|1|BA|G|232
4W29|1|BA|A|233
4W29|1|BA|C|234
4W29|1|BA|U|235
*
4W29|1|BA|A|262
4W29|1|BA|C|263
4W29|1|BA|C|264
4W29|1|BA|A|265
4W29|1|BA|G|266
*
4W29|1|BA|C|426
4W29|1|BA|U|427
4W29|1|BA|A|428
4W29|1|BA|A|429
4W29|1|BA|G|430
4W29|1|BA|U|431
4W29|1|BA|A|432
4W29|1|BA|C|433

Current chains

Chain BA

23S Ribosomal RNA

Nearby chains

Chain B7

50S ribosomal protein L34