J6_4W29_002
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCC*GCCUAGUGAACC*GAUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 4W29|1|BA|U|2076, 4W29|1|BA|A|2388, 4W29|1|BA|U|2390, 4W29|1|BA|U|2423, 4W29|1|BA|G|2428, 4W29|1|BA|A|2430
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4W29|1|BA|U|2074
4W29|1|BA|U|2075
4W29|1|BA|U|2076
4W29|1|BA|A|2077
*
4W29|1|BA|U|2243
4W29|1|BA|U|2244
4W29|1|BA|U|2245
4W29|1|BA|G|2246
*
4W29|1|BA|C|2258
4W29|1|BA|G|2259
*
4W29|1|BA|C|2281
4W29|1|BA|G|2282
4W29|1|BA|C|2283
4W29|1|BA|C|2284
*
4W29|1|BA|G|2384
4W29|1|BA|C|2385
4W29|1|BA|C|2386
4W29|1|BA|U|2387
4W29|1|BA|A|2388
4W29|1|BA|G|2389
4W29|1|BA|U|2390
4W29|1|BA|G|2391
4W29|1|BA|A|2392
4W29|1|BA|A|2393
4W29|1|BA|C|2394
4W29|1|BA|C|2395
*
4W29|1|BA|G|2421
4W29|1|BA|A|2422
4W29|1|BA|U|2423
4W29|1|BA|C|2424
4W29|1|BA|A|2425
4W29|1|BA|A|2426
4W29|1|BA|C|2427
4W29|1|BA|G|2428
4W29|1|BA|G|2429
4W29|1|BA|A|2430
4W29|1|BA|U|2431
4W29|1|BA|A|2432
4W29|1|BA|A|2433
4W29|1|BA|A|2434
4W29|1|BA|A|2435
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain AW
- Transfer RNA; tRNA
- Chain B0
- 50S ribosomal protein L27
- Chain B1
- 50S ribosomal protein L28
- Chain B6
- 50S ribosomal protein L33
- Chain B8
- 50S ribosomal protein L35
- Chain BD
- 50S ribosomal protein L2
- Chain BP
- 50S ribosomal protein L15
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