J6_4WT8_002
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCC*GCCUAGUGAACC*GAUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 4WT8|1|C1|U|2097, 4WT8|1|C1|A|2399, 4WT8|1|C1|U|2401, 4WT8|1|C1|G|2439, 4WT8|1|C1|A|2441, 4WT8|1|C1|U|2442
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WT8|1|C1|U|2095
4WT8|1|C1|U|2096
4WT8|1|C1|U|2097
4WT8|1|C1|A|2098
*
4WT8|1|C1|U|2254
4WT8|1|C1|U|2255
4WT8|1|C1|U|2256
4WT8|1|C1|G|2257
*
4WT8|1|C1|C|2269
4WT8|1|C1|G|2270
*
4WT8|1|C1|C|2292
4WT8|1|C1|G|2293
4WT8|1|C1|C|2294
4WT8|1|C1|C|2295
*
4WT8|1|C1|G|2395
4WT8|1|C1|C|2396
4WT8|1|C1|C|2397
4WT8|1|C1|U|2398
4WT8|1|C1|A|2399
4WT8|1|C1|G|2400
4WT8|1|C1|U|2401
4WT8|1|C1|G|2402
4WT8|1|C1|A|2403
4WT8|1|C1|A|2404
4WT8|1|C1|C|2405
4WT8|1|C1|C|2406
*
4WT8|1|C1|G|2432
4WT8|1|C1|A|2433
4WT8|1|C1|U|2434
4WT8|1|C1|C|2435
4WT8|1|C1|A|2436
4WT8|1|C1|A|2437
4WT8|1|C1|C|2438
4WT8|1|C1|G|2439
4WT8|1|C1|G|2440
4WT8|1|C1|A|2441
4WT8|1|C1|U|2442
4WT8|1|C1|A|2443
4WT8|1|C1|A|2444
4WT8|1|C1|A|2445
4WT8|1|C1|A|2446
Current chains
- Chain C1
- 23S rRNA (2899-MER)
Nearby chains
- Chain C3
- Transfer RNA; tRNA
- Chain C7
- 50S ribosomal protein L33
- Chain C9
- 50S ribosomal protein L35
- Chain CB
- 50S ribosomal protein L2
- Chain CH
- 50S ribosomal protein L28
- Chain CO
- 50S ribosomal protein L15
- Chain Ca
- 50S ribosomal protein L27
Coloring options: