J6_4WT8_003

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4WT8|1|D1|A|211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WT8|1|D1|G|43
4WT8|1|D1|C|44
*
4WT8|1|D1|G|167
4WT8|1|D1|G|168
4WT8|1|D1|A|169
4WT8|1|D1|A|170
4WT8|1|D1|C|171
*
4WT8|1|D1|G|202
4WT8|1|D1|G|203
4WT8|1|D1|A|204
4WT8|1|D1|G|205
4WT8|1|D1|A|206
4WT8|1|D1|G|207
4WT8|1|D1|G|208
4WT8|1|D1|A|209
4WT8|1|D1|A|210
4WT8|1|D1|A|211
4WT8|1|D1|G|212
*
4WT8|1|D1|C|219
4WT8|1|D1|G|220
4WT8|1|D1|A|221
4WT8|1|D1|C|222
4WT8|1|D1|U|223
*
4WT8|1|D1|A|250
4WT8|1|D1|C|251
4WT8|1|D1|C|252
4WT8|1|D1|A|253
4WT8|1|D1|G|254
*
4WT8|1|D1|C|452
4WT8|1|D1|U|453
4WT8|1|D1|A|454
4WT8|1|D1|A|455
4WT8|1|D1|G|456
4WT8|1|D1|U|457
4WT8|1|D1|A|458
4WT8|1|D1|C|459

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains

Chain D8

50S ribosomal protein L34