J6_4WWW_002
3D structure
- PDB id
- 4WWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to CEM-101
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUA*UUUG*CU*AGCA*UCAUAGUGAUCC*GCUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 4WWW|1|RA|U|2076, 4WWW|1|RA|A|2388, 4WWW|1|RA|U|2390, 4WWW|1|RA|G|2428, 4WWW|1|RA|A|2430, 4WWW|1|RA|U|2431
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WWW|1|RA|U|2074
4WWW|1|RA|U|2075
4WWW|1|RA|U|2076
4WWW|1|RA|A|2077
*
4WWW|1|RA|U|2243
4WWW|1|RA|U|2244
4WWW|1|RA|U|2245
4WWW|1|RA|G|2246
*
4WWW|1|RA|C|2258
4WWW|1|RA|U|2259
*
4WWW|1|RA|A|2281
4WWW|1|RA|G|2282
4WWW|1|RA|C|2283
4WWW|1|RA|A|2284
*
4WWW|1|RA|U|2384
4WWW|1|RA|C|2385
4WWW|1|RA|A|2386
4WWW|1|RA|U|2387
4WWW|1|RA|A|2388
4WWW|1|RA|G|2389
4WWW|1|RA|U|2390
4WWW|1|RA|G|2391
4WWW|1|RA|A|2392
4WWW|1|RA|U|2393
4WWW|1|RA|C|2394
4WWW|1|RA|C|2395
*
4WWW|1|RA|G|2421
4WWW|1|RA|C|2422
4WWW|1|RA|U|2423
4WWW|1|RA|C|2424
4WWW|1|RA|A|2425
4WWW|1|RA|A|2426
4WWW|1|RA|C|2427
4WWW|1|RA|G|2428
4WWW|1|RA|G|2429
4WWW|1|RA|A|2430
4WWW|1|RA|U|2431
4WWW|1|RA|A|2432
4WWW|1|RA|A|2433
4WWW|1|RA|A|2434
4WWW|1|RA|A|2435
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R1
- 50S ribosomal protein L33
- Chain R3
- 50S ribosomal protein L35
- Chain RC
- 50S ribosomal protein L2
- Chain RL
- 50S ribosomal protein L15
- Chain RW
- 50S ribosomal protein L27
- Chain RX
- 50S ribosomal protein L28
Coloring options: