J6_5AJ0_002
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG
- Length
- 27 nucleotides
- Bulged bases
- 5AJ0|1|A2|C|1483
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AJ0|1|A2|C|1335
5AJ0|1|A2|G|1336
5AJ0|1|A2|A|1337
5AJ0|1|A2|G|1338
*
5AJ0|1|A2|C|1367
5AJ0|1|A2|G|1368
5AJ0|1|A2|C|1369
5AJ0|1|A2|A|1370
5AJ0|1|A2|A|1371
*
5AJ0|1|A2|U|1378
5AJ0|1|A2|G|1379
5AJ0|1|A2|A|1380
5AJ0|1|A2|A|1381
5AJ0|1|A2|G|1382
*
5AJ0|1|A2|C|1401
5AJ0|1|A2|G|1402
5AJ0|1|A2|A|1403
5AJ0|1|A2|G|1404
*
5AJ0|1|A2|C|1446
5AJ0|1|A2|G|1447
5AJ0|1|A2|G|1448
*
5AJ0|1|A2|C|1481
5AJ0|1|A2|A|1482
5AJ0|1|A2|C|1483
5AJ0|1|A2|G|1484
5AJ0|1|A2|A|1485
5AJ0|1|A2|G|1486
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AC
- 60S ribosomal protein L4
- Chain AL
- 60S ribosomal protein L13
- Chain AQ
- 60S ribosomal protein L18
- Chain Aa
- 60S ribosomal protein L27a
- Chain Ab
- 60S ribosomal protein L29
- Chain Ai
- 60S ribosomal protein L36
Coloring options: