J6_5L3P_001

3D structure

PDB id

5L3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAUC*GAGAUU*AGCAG*CUAAAUAC

Length

38 nucleotides

Bulged bases

5L3P|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5L3P|1|A|G|45
5L3P|1|A|G|46
*
5L3P|1|A|C|179
5L3P|1|A|G|180
5L3P|1|A|A|181
5L3P|1|A|A|182
5L3P|1|A|C|183
*
5L3P|1|A|G|214
5L3P|1|A|G|215
5L3P|1|A|A|216
5L3P|1|A|A|217
5L3P|1|A|A|218
5L3P|1|A|A|219
5L3P|1|A|G|220
5L3P|1|A|A|221
5L3P|1|A|A|222
5L3P|1|A|A|223
5L3P|1|A|U|224
5L3P|1|A|C|225
*
5L3P|1|A|G|230
5L3P|1|A|A|231
5L3P|1|A|G|232
5L3P|1|A|A|233
5L3P|1|A|U|234
5L3P|1|A|U|235
*
5L3P|1|A|A|262
5L3P|1|A|G|263
5L3P|1|A|C|264
5L3P|1|A|A|265
5L3P|1|A|G|266
*
5L3P|1|A|C|426
5L3P|1|A|U|427
5L3P|1|A|A|428
5L3P|1|A|A|429
5L3P|1|A|A|430
5L3P|1|A|U|431
5L3P|1|A|A|432
5L3P|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 7

50S ribosomal protein L34