J6_5L3P_002
3D structure
- PDB id
- 5L3P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUUA*UUUG*CU*AGCA*UCAUAGUGAUCC*GCUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 5L3P|1|A|U|2076, 5L3P|1|A|A|2388, 5L3P|1|A|U|2390, 5L3P|1|A|U|2423, 5L3P|1|A|G|2428, 5L3P|1|A|A|2430
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5L3P|1|A|U|2074
5L3P|1|A|U|2075
5L3P|1|A|U|2076
5L3P|1|A|A|2077
*
5L3P|1|A|U|2243
5L3P|1|A|U|2244
5L3P|1|A|U|2245
5L3P|1|A|G|2246
*
5L3P|1|A|C|2258
5L3P|1|A|U|2259
*
5L3P|1|A|A|2281
5L3P|1|A|G|2282
5L3P|1|A|C|2283
5L3P|1|A|A|2284
*
5L3P|1|A|U|2384
5L3P|1|A|C|2385
5L3P|1|A|A|2386
5L3P|1|A|U|2387
5L3P|1|A|A|2388
5L3P|1|A|G|2389
5L3P|1|A|U|2390
5L3P|1|A|G|2391
5L3P|1|A|A|2392
5L3P|1|A|U|2393
5L3P|1|A|C|2394
5L3P|1|A|C|2395
*
5L3P|1|A|G|2421
5L3P|1|A|C|2422
5L3P|1|A|U|2423
5L3P|1|A|C|2424
5L3P|1|A|A|2425
5L3P|1|A|A|2426
5L3P|1|A|C|2427
5L3P|1|A|G|2428
5L3P|1|A|G|2429
5L3P|1|A|A|2430
5L3P|1|A|U|2431
5L3P|1|A|A|2432
5L3P|1|A|A|2433
5L3P|1|A|A|2434
5L3P|1|A|A|2435
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L27
- Chain 1
- 50S ribosomal protein L28
- Chain 6
- 50S ribosomal protein L33
- Chain 8
- 50S ribosomal protein L35
- Chain D
- 50S ribosomal protein L2
- Chain P
- 50S ribosomal protein L15
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