J6_5LKS_003
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAGGC*GCCGAG*CGGC*GCACGAG
- Length
- 33 nucleotides
- Bulged bases
- 5LKS|1|L5|C|1501
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|L5|C|1352
5LKS|1|L5|G|1353
5LKS|1|L5|A|1354
5LKS|1|L5|G|1355
*
5LKS|1|L5|C|1384
5LKS|1|L5|G|1385
5LKS|1|L5|C|1386
5LKS|1|L5|A|1387
5LKS|1|L5|A|1388
*
5LKS|1|L5|U|1395
5LKS|1|L5|G|1396
5LKS|1|L5|A|1397
5LKS|1|L5|A|1398
5LKS|1|L5|G|1399
5LKS|1|L5|G|1400
5LKS|1|L5|C|1401
*
5LKS|1|L5|G|1416
5LKS|1|L5|C|1417
5LKS|1|L5|C|1418
5LKS|1|L5|G|1419
5LKS|1|L5|A|1420
5LKS|1|L5|G|1421
*
5LKS|1|L5|C|1464
5LKS|1|L5|G|1465
5LKS|1|L5|G|1466
5LKS|1|L5|C|1467
*
5LKS|1|L5|G|1498
5LKS|1|L5|C|1499
5LKS|1|L5|A|1500
5LKS|1|L5|C|1501
5LKS|1|L5|G|1502
5LKS|1|L5|A|1503
5LKS|1|L5|G|1504
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
- Chain LL
- 60S ribosomal protein L13
- Chain LQ
- 60S ribosomal protein L18
- Chain La
- 60S ribosomal protein L27a
- Chain Lb
- Ribosomal protein L29, isoform CRA_a
- Chain Li
- 60S ribosomal protein L36
Coloring options: