J6_5LKS_004
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGCUGCGGGAUGAACCGAACG*CC*GAGUAG
- Length
- 41 nucleotides
- Bulged bases
- 5LKS|1|L5|G|1854
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|L5|C|1666
5LKS|1|L5|G|1667
5LKS|1|L5|A|1668
5LKS|1|L5|A|1669
5LKS|1|L5|G|1670
5LKS|1|L5|U|1671
*
5LKS|1|L5|A|1684
5LKS|1|L5|G|1685
*
5LKS|1|L5|U|1852
5LKS|1|L5|G|1853
5LKS|1|L5|G|1854
5LKS|1|L5|G|1855
*
5LKS|1|L5|C|1879
5LKS|1|L5|G|1880
5LKS|1|L5|C|1881
5LKS|1|L5|U|1882
5LKS|1|L5|G|1883
5LKS|1|L5|C|1884
5LKS|1|L5|G|1885
5LKS|1|L5|G|1886
5LKS|1|L5|G|1887
5LKS|1|L5|A|1888
5LKS|1|L5|U|1889
5LKS|1|L5|G|1890
5LKS|1|L5|A|1891
5LKS|1|L5|A|1892
5LKS|1|L5|C|1893
5LKS|1|L5|C|1894
5LKS|1|L5|G|1895
5LKS|1|L5|A|1896
5LKS|1|L5|A|1897
5LKS|1|L5|C|1898
5LKS|1|L5|G|1899
*
5LKS|1|L5|C|2077
5LKS|1|L5|C|2078
*
5LKS|1|L5|G|2278
5LKS|1|L5|A|2279
5LKS|1|L5|G|2280
5LKS|1|L5|U|2281
5LKS|1|L5|A|2282
5LKS|1|L5|G|2283
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LC
- 60S ribosomal protein L4
- Chain LF
- 60S ribosomal protein L7
- Chain LL
- 60S ribosomal protein L13
- Chain LQ
- 60S ribosomal protein L18
- Chain LT
- 60S ribosomal protein L21
- Chain La
- 60S ribosomal protein L27a
- Chain Lb
- Ribosomal protein L29, isoform CRA_a
- Chain Le
- 60S ribosomal protein L32
- Chain Lf
- 60S ribosomal protein L35a
Coloring options: