J6_5LZE_001

3D structure

PDB id

5LZE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

5LZE|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZE|1|A|G|45
5LZE|1|A|G|46
*
5LZE|1|A|C|179
5LZE|1|A|G|180
5LZE|1|A|A|181
5LZE|1|A|A|182
5LZE|1|A|C|183
*
5LZE|1|A|G|214
5LZE|1|A|G|215
5LZE|1|A|A|216
5LZE|1|A|A|217
5LZE|1|A|A|218
5LZE|1|A|A|219
5LZE|1|A|G|220
5LZE|1|A|A|221
5LZE|1|A|A|222
5LZE|1|A|A|223
5LZE|1|A|U|224
*
5LZE|1|A|A|231
5LZE|1|A|G|232
5LZE|1|A|A|233
5LZE|1|A|U|234
5LZE|1|A|U|235
*
5LZE|1|A|A|262
5LZE|1|A|G|263
5LZE|1|A|C|264
5LZE|1|A|A|265
5LZE|1|A|G|266
*
5LZE|1|A|C|426
5LZE|1|A|U|427
5LZE|1|A|A|428
5LZE|1|A|A|429
5LZE|1|A|A|430
5LZE|1|A|U|431
5LZE|1|A|A|432
5LZE|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34