J6_5NRG_001
3D structure
- PDB id
- 5NRG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.44 Å
Loop
- Sequence
- GC*GCACAC*GGAAGAGAAAG*CGAUU*AAGAG*CUAAAUAC
- Length
- 37 nucleotides
- Bulged bases
- 5NRG|1|X|C|184, 5NRG|1|X|A|226
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5NRG|1|X|G|45
5NRG|1|X|C|46
*
5NRG|1|X|G|181
5NRG|1|X|C|182
5NRG|1|X|A|183
5NRG|1|X|C|184
5NRG|1|X|A|185
5NRG|1|X|C|186
*
5NRG|1|X|G|217
5NRG|1|X|G|218
5NRG|1|X|A|219
5NRG|1|X|A|220
5NRG|1|X|G|221
5NRG|1|X|A|222
5NRG|1|X|G|223
5NRG|1|X|A|224
5NRG|1|X|A|225
5NRG|1|X|A|226
5NRG|1|X|G|227
*
5NRG|1|X|C|234
5NRG|1|X|G|235
5NRG|1|X|A|236
5NRG|1|X|U|237
5NRG|1|X|U|238
*
5NRG|1|X|A|265
5NRG|1|X|A|266
5NRG|1|X|G|267
5NRG|1|X|A|268
5NRG|1|X|G|269
*
5NRG|1|X|C|472
5NRG|1|X|U|473
5NRG|1|X|A|474
5NRG|1|X|A|475
5NRG|1|X|A|476
5NRG|1|X|U|477
5NRG|1|X|A|478
5NRG|1|X|C|479
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain C
- 50S ribosomal protein L4
Coloring options: