J6_5O60_001
3D structure
- PDB id
- 5O60 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.18 Å
Loop
- Sequence
- GC*GGAAC*GGAAGAGAAAA*UGAUU*AGGAUG*CUGAAUAC
- Length
- 37 nucleotides
- Bulged bases
- 5O60|1|A|A|222, 5O60|1|A|U|266
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5O60|1|A|G|42
5O60|1|A|C|43
*
5O60|1|A|G|178
5O60|1|A|G|179
5O60|1|A|A|180
5O60|1|A|A|181
5O60|1|A|C|182
*
5O60|1|A|G|213
5O60|1|A|G|214
5O60|1|A|A|215
5O60|1|A|A|216
5O60|1|A|G|217
5O60|1|A|A|218
5O60|1|A|G|219
5O60|1|A|A|220
5O60|1|A|A|221
5O60|1|A|A|222
5O60|1|A|A|223
*
5O60|1|A|U|231
5O60|1|A|G|232
5O60|1|A|A|233
5O60|1|A|U|234
5O60|1|A|U|235
*
5O60|1|A|A|262
5O60|1|A|G|263
5O60|1|A|G|264
5O60|1|A|A|265
5O60|1|A|U|266
5O60|1|A|G|267
*
5O60|1|A|C|514
5O60|1|A|U|515
5O60|1|A|G|516
5O60|1|A|A|517
5O60|1|A|A|518
5O60|1|A|U|519
5O60|1|A|A|520
5O60|1|A|C|521
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain d
- 50S ribosomal protein L34
Coloring options: