J6_5OT7_002
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCC*GCCUAGUGAACCG*CGAUCAACGGAUAAAA
- Length
- 43 nucleotides
- Bulged bases
- 5OT7|1|4|U|2076, 5OT7|1|4|U|2390, 5OT7|1|4|G|2421, 5OT7|1|4|G|2428, 5OT7|1|4|A|2430, 5OT7|1|4|U|2431
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5OT7|1|4|U|2074
5OT7|1|4|U|2075
5OT7|1|4|U|2076
5OT7|1|4|A|2077
*
5OT7|1|4|U|2243
5OT7|1|4|U|2244
5OT7|1|4|U|2245
5OT7|1|4|G|2246
*
5OT7|1|4|C|2258
5OT7|1|4|G|2259
*
5OT7|1|4|C|2281
5OT7|1|4|G|2282
5OT7|1|4|C|2283
5OT7|1|4|C|2284
*
5OT7|1|4|G|2384
5OT7|1|4|C|2385
5OT7|1|4|C|2386
5OT7|1|4|U|2387
5OT7|1|4|A|2388
5OT7|1|4|G|2389
5OT7|1|4|U|2390
5OT7|1|4|G|2391
5OT7|1|4|A|2392
5OT7|1|4|A|2393
5OT7|1|4|C|2394
5OT7|1|4|C|2395
5OT7|1|4|G|2396
*
5OT7|1|4|C|2420
5OT7|1|4|G|2421
5OT7|1|4|A|2422
5OT7|1|4|U|2423
5OT7|1|4|C|2424
5OT7|1|4|A|2425
5OT7|1|4|A|2426
5OT7|1|4|C|2427
5OT7|1|4|G|2428
5OT7|1|4|G|2429
5OT7|1|4|A|2430
5OT7|1|4|U|2431
5OT7|1|4|A|2432
5OT7|1|4|A|2433
5OT7|1|4|A|2434
5OT7|1|4|A|2435
Current chains
- Chain 4
- 23S Ribosomal RNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain V
- 50S ribosomal protein L27
- Chain W
- 50S ribosomal protein L28
- Chain b
- 50S ribosomal protein L33
- Chain d
- 50S ribosomal protein L35
- Chain g
- 50S ribosomal protein L2
- Chain q
- 50S ribosomal protein L15
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