J6_5T2C_001
3D structure
- PDB id
- 5T2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human ribosome at 3.6 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGCGAC*GGAGAAGAAAC*GGAUU*AAGAG*CUAAAUAC*GUC
- Length
- 38 nucleotides
- Bulged bases
- 5T2C|1|A|A|66, 5T2C|1|C|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2C|1|A|G|21
5T2C|1|A|G|22
5T2C|1|A|C|23
5T2C|1|A|G|24
5T2C|1|A|A|25
5T2C|1|A|C|26
*
5T2C|1|A|G|57
5T2C|1|A|G|58
5T2C|1|A|A|59
5T2C|1|A|G|60
5T2C|1|A|A|61
5T2C|1|A|A|62
5T2C|1|A|G|63
5T2C|1|A|A|64
5T2C|1|A|A|65
5T2C|1|A|A|66
5T2C|1|A|C|67
*
5T2C|1|A|G|74
5T2C|1|A|G|75
5T2C|1|A|A|76
5T2C|1|A|U|77
5T2C|1|A|U|78
*
5T2C|1|A|A|105
5T2C|1|A|A|106
5T2C|1|A|G|107
5T2C|1|A|A|108
5T2C|1|A|G|109
*
5T2C|1|A|C|332
5T2C|1|A|U|333
5T2C|1|A|A|334
5T2C|1|A|A|335
5T2C|1|A|A|336
5T2C|1|A|U|337
5T2C|1|A|A|338
5T2C|1|A|C|339
*
5T2C|1|C|G|33
5T2C|1|C|U|34
5T2C|1|C|C|35
Current chains
- Chain A
- 28S rRNA
- Chain C
- 5.8S rRNA
Nearby chains
- Chain b
- 60S ribosomal protein L35
- Chain c
- 60S ribosomal protein L36
- Chain d
- 60S ribosomal protein L37
- Chain r
- 60S ribosomal protein L13
- Chain t
- 60S ribosomal protein L15
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