J6_5T2C_002
3D structure
- PDB id
- 5T2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human ribosome at 3.6 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG
- Length
- 27 nucleotides
- Bulged bases
- 5T2C|1|A|C|1501, 5T2C|1|A|G|1502
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2C|1|A|C|1352
5T2C|1|A|G|1353
5T2C|1|A|A|1354
5T2C|1|A|G|1355
*
5T2C|1|A|C|1384
5T2C|1|A|G|1385
5T2C|1|A|C|1386
5T2C|1|A|A|1387
5T2C|1|A|A|1388
*
5T2C|1|A|U|1395
5T2C|1|A|G|1396
5T2C|1|A|A|1397
5T2C|1|A|A|1398
5T2C|1|A|G|1399
*
5T2C|1|A|C|1418
5T2C|1|A|G|1419
5T2C|1|A|A|1420
5T2C|1|A|G|1421
*
5T2C|1|A|C|1464
5T2C|1|A|G|1465
5T2C|1|A|G|1466
*
5T2C|1|A|C|1499
5T2C|1|A|A|1500
5T2C|1|A|C|1501
5T2C|1|A|G|1502
5T2C|1|A|A|1503
5T2C|1|A|G|1504
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain F
- 60S ribosomal protein L4
- Chain K
- 60S ribosomal protein L18
- Chain U
- 60S ribosomal protein L27a
- Chain V
- 60S ribosomal protein L29
- Chain c
- 60S ribosomal protein L36
- Chain r
- 60S ribosomal protein L13
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