J6_5TCU_002
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGUGGAGCUUUACUGU*GCAGUUUG*CGCC*GGCGCUC*GACUUAGUGAUCC*GCUCAACGGAUAAAAGCUACCCCG
- Length
- 72 nucleotides
- Bulged bases
- 5TCU|1|B|U|2103, 5TCU|1|B|G|2455, 5TCU|1|B|U|2458, 5TCU|1|B|A|2466
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5TCU|1|B|C|2093
5TCU|1|B|G|2094
5TCU|1|B|U|2095
5TCU|1|B|G|2096
5TCU|1|B|G|2097
5TCU|1|B|A|2098
5TCU|1|B|G|2099
5TCU|1|B|C|2100
5TCU|1|B|U|2101
5TCU|1|B|U|2102
5TCU|1|B|U|2103
5TCU|1|B|A|2104
5TCU|1|B|C|2105
5TCU|1|B|U|2106
5TCU|1|B|G|2107
5TCU|1|B|U|2108
*
5TCU|1|B|G|2266
5TCU|1|B|C|2267
5TCU|1|B|A|2268
5TCU|1|B|G|2269
5TCU|1|B|U|2270
5TCU|1|B|U|2271
5TCU|1|B|U|2272
5TCU|1|B|G|2273
*
5TCU|1|B|C|2285
5TCU|1|B|G|2286
5TCU|1|B|C|2287
5TCU|1|B|C|2288
*
5TCU|1|B|G|2306
5TCU|1|B|G|2307
5TCU|1|B|C|2308
5TCU|1|B|G|2309
5TCU|1|B|C|2310
5TCU|1|B|U|2311
5TCU|1|B|C|2312
*
5TCU|1|B|G|2410
5TCU|1|B|A|2411
5TCU|1|B|C|2412
5TCU|1|B|U|2413
5TCU|1|B|U|2414
5TCU|1|B|A|2415
5TCU|1|B|G|2416
5TCU|1|B|U|2417
5TCU|1|B|G|2418
5TCU|1|B|A|2419
5TCU|1|B|U|2420
5TCU|1|B|C|2421
5TCU|1|B|C|2422
*
5TCU|1|B|G|2448
5TCU|1|B|C|2449
5TCU|1|B|U|2450
5TCU|1|B|C|2451
5TCU|1|B|A|2452
5TCU|1|B|A|2453
5TCU|1|B|C|2454
5TCU|1|B|G|2455
5TCU|1|B|G|2456
5TCU|1|B|A|2457
5TCU|1|B|U|2458
5TCU|1|B|A|2459
5TCU|1|B|A|2460
5TCU|1|B|A|2461
5TCU|1|B|A|2462
5TCU|1|B|G|2463
5TCU|1|B|C|2464
5TCU|1|B|U|2465
5TCU|1|B|A|2466
5TCU|1|B|C|2467
5TCU|1|B|C|2468
5TCU|1|B|C|2469
5TCU|1|B|C|2470
5TCU|1|B|G|2471
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain D
- Transfer RNA; tRNA
- Chain E
- Transfer RNA; tRNA
- Chain L2
- 50S ribosomal protein L2
- Chain L9
- 50S ribosomal protein L27
- Chain LA
- 50S ribosomal protein L28
- Chain LH
- 50S ribosomal protein L35
- Chain LJ
- 50S ribosomal protein L4
- Chain LO
- 50S ribosomal protein L15
- Chain LP
- 50S ribosomal protein L16
- Chain LS
- 50S ribosomal protein L33 1
Coloring options: