J6_5UZ4_001
3D structure
- PDB id
- 5UZ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- GCCUAACACAUGCAAGUCGAA*UGGCGGACGGG*CACUG*CAGAC*GGCAGCAGUGGGGAAUAU*AGC
- Length
- 63 nucleotides
- Bulged bases
- 5UZ4|1|A|C|48, 5UZ4|1|A|A|50, 5UZ4|1|A|A|60, 5UZ4|1|A|G|64, 5UZ4|1|A|A|65, 5UZ4|1|A|A|109, 5UZ4|1|A|A|353
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5UZ4|1|A|G|46
5UZ4|1|A|C|47
5UZ4|1|A|C|48
5UZ4|1|A|U|49
5UZ4|1|A|A|50
5UZ4|1|A|A|51
5UZ4|1|A|C|52
5UZ4|1|A|A|53
5UZ4|1|A|C|54
5UZ4|1|A|A|55
5UZ4|1|A|U|56
5UZ4|1|A|G|57
5UZ4|1|A|C|58
5UZ4|1|A|A|59
5UZ4|1|A|A|60
5UZ4|1|A|G|61
5UZ4|1|A|U|62
5UZ4|1|A|C|63
5UZ4|1|A|G|64
5UZ4|1|A|A|65
5UZ4|1|A|A|66
*
5UZ4|1|A|U|103
5UZ4|1|A|G|104
5UZ4|1|A|G|105
5UZ4|1|A|C|106
5UZ4|1|A|G|107
5UZ4|1|A|G|108
5UZ4|1|A|A|109
5UZ4|1|A|C|110
5UZ4|1|A|G|111
5UZ4|1|A|G|112
5UZ4|1|A|G|113
*
5UZ4|1|A|C|314
5UZ4|1|A|A|315
5UZ4|1|A|C|316
5UZ4|1|A|U|317
5UZ4|1|A|G|318
*
5UZ4|1|A|C|335
5UZ4|1|A|A|336
5UZ4|1|A|G|337
5UZ4|1|A|A|338
5UZ4|1|A|C|339
*
5UZ4|1|A|G|350
5UZ4|1|A|G|351
5UZ4|1|A|C|352
5UZ4|1|A|A|353
5UZ4|1|A|G|354
5UZ4|1|A|C|355
5UZ4|1|A|A|356
5UZ4|1|A|G|357
5UZ4|1|A|U|358
5UZ4|1|A|G|359
5UZ4|1|A|G|360
5UZ4|1|A|G|361
5UZ4|1|A|G|362
5UZ4|1|A|A|363
5UZ4|1|A|A|364
5UZ4|1|A|U|365
5UZ4|1|A|A|366
5UZ4|1|A|U|367
*
5UZ4|1|A|A|393
5UZ4|1|A|G|394
5UZ4|1|A|C|395
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain L
- 30S ribosomal protein S12
- Chain P
- 30S ribosomal protein S16
- Chain T
- 30S ribosomal protein S20
Coloring options: