J6_5V7Q_001
3D structure
- PDB id
- 5V7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GC*GGAAC*GGAGGAGAAAA*UGAUU*AACAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 5V7Q|1|A|A|225
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5V7Q|1|A|G|45
5V7Q|1|A|C|46
*
5V7Q|1|A|G|181
5V7Q|1|A|G|182
5V7Q|1|A|A|183
5V7Q|1|A|A|184
5V7Q|1|A|C|185
*
5V7Q|1|A|G|216
5V7Q|1|A|G|217
5V7Q|1|A|A|218
5V7Q|1|A|G|219
5V7Q|1|A|G|220
5V7Q|1|A|A|221
5V7Q|1|A|G|222
5V7Q|1|A|A|223
5V7Q|1|A|A|224
5V7Q|1|A|A|225
5V7Q|1|A|A|226
*
5V7Q|1|A|U|233
5V7Q|1|A|G|234
5V7Q|1|A|A|235
5V7Q|1|A|U|236
5V7Q|1|A|U|237
*
5V7Q|1|A|A|264
5V7Q|1|A|A|265
5V7Q|1|A|C|266
5V7Q|1|A|A|267
5V7Q|1|A|G|268
*
5V7Q|1|A|C|515
5V7Q|1|A|U|516
5V7Q|1|A|A|517
5V7Q|1|A|A|518
5V7Q|1|A|A|519
5V7Q|1|A|U|520
5V7Q|1|A|A|521
5V7Q|1|A|C|522
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
Coloring options: