J6_5ZLU_003
3D structure
- PDB id
- 5ZLU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome Structure bound to ABC-F protein.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAUG*CCGCCUG*CAAAGGAAUUGA*UACACACCG*CAAGGUA*UG
- Length
- 42 nucleotides
- Bulged bases
- 5ZLU|1|G|A|1394, 5ZLU|1|G|C|1397, 5ZLU|1|G|C|1400, 5ZLU|1|G|A|1503, 5ZLU|1|G|G|1505, 5ZLU|1|G|U|1506
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5ZLU|1|G|C|817
5ZLU|1|G|G|818
5ZLU|1|G|A|819
5ZLU|1|G|U|820
5ZLU|1|G|G|821
*
5ZLU|1|G|C|879
5ZLU|1|G|C|880
5ZLU|1|G|G|881
5ZLU|1|G|C|882
5ZLU|1|G|C|883
5ZLU|1|G|U|884
5ZLU|1|G|G|885
*
5ZLU|1|G|C|912
5ZLU|1|G|A|913
5ZLU|1|G|A|914
5ZLU|1|G|A|915
5ZLU|1|G|G|916
5ZLU|1|G|G|917
5ZLU|1|G|A|918
5ZLU|1|G|A|919
5ZLU|1|G|U|920
5ZLU|1|G|U|921
5ZLU|1|G|G|922
5ZLU|1|G|A|923
*
5ZLU|1|G|U|1393
5ZLU|1|G|A|1394
5ZLU|1|G|C|1395
5ZLU|1|G|A|1396
5ZLU|1|G|C|1397
5ZLU|1|G|A|1398
5ZLU|1|G|C|1399
5ZLU|1|G|C|1400
5ZLU|1|G|G|1401
*
5ZLU|1|G|C|1501
5ZLU|1|G|A|1502
5ZLU|1|G|A|1503
5ZLU|1|G|G|1504
5ZLU|1|G|G|1505
5ZLU|1|G|U|1506
5ZLU|1|G|A|1507
*
5ZLU|1|G|U|1528
5ZLU|1|G|G|1529
Current chains
- Chain G
- 16S ribosomal RNA
Nearby chains
- Chain A
- 30S ribosomal protein S17
- Chain DD
- Transfer RNA; tRNA
- Chain K
- 30S ribosomal protein S5
- Chain N
- 30S ribosomal protein S8
- Chain P
- 30S ribosomal protein S11
- Chain Q
- 30S ribosomal protein S12
- Chain W
- RNA (25-mer)
Coloring options: