J6_5ZLU_004

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAAAU*AG*UGAG*CGAGCGCGGGAACAACCGAGAC*GGU*GCGGUAG

Length

44 nucleotides

Bulged bases

5ZLU|1|V|A|945

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZLU|1|V|C|817
5ZLU|1|V|G|818
5ZLU|1|V|A|819
5ZLU|1|V|A|820
5ZLU|1|V|A|821
5ZLU|1|V|U|822
*
5ZLU|1|V|A|835
5ZLU|1|V|G|836
*
5ZLU|1|V|U|943
5ZLU|1|V|G|944
5ZLU|1|V|A|945
5ZLU|1|V|G|946
*
5ZLU|1|V|C|971
5ZLU|1|V|G|972
5ZLU|1|V|A|973
5ZLU|1|V|G|974
5ZLU|1|V|C|974|||A
5ZLU|1|V|G|975
5ZLU|1|V|C|976
5ZLU|1|V|G|977
5ZLU|1|V|G|978
5ZLU|1|V|G|979
5ZLU|1|V|A|980
5ZLU|1|V|A|981
5ZLU|1|V|C|982
5ZLU|1|V|A|983
5ZLU|1|V|A|984
5ZLU|1|V|C|985
5ZLU|1|V|C|986
5ZLU|1|V|G|987
5ZLU|1|V|A|988
5ZLU|1|V|G|989
5ZLU|1|V|A|990
5ZLU|1|V|C|991
*
5ZLU|1|V|G|1163
5ZLU|1|V|G|1164
5ZLU|1|V|U|1165
*
5ZLU|1|V|G|1184
5ZLU|1|V|C|1185
5ZLU|1|V|G|1186
5ZLU|1|V|G|1187
5ZLU|1|V|U|1188
5ZLU|1|V|A|1189
5ZLU|1|V|G|1190

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain AA

50S ribosomal protein L35

Chain X

5S ribosomal RNA; 5S rRNA

Chain i

50S ribosomal protein L15

Chain n

50S ribosomal protein L20

Chain o

50S ribosomal protein L21

Chain v

50S ribosomal protein L30