J6_6BY1_001

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUUC*GAGCAG*CUAAAUAC

Length

38 nucleotides

Bulged bases

6BY1|1|CA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BY1|1|CA|G|45
6BY1|1|CA|G|46
*
6BY1|1|CA|C|179
6BY1|1|CA|G|180
6BY1|1|CA|A|181
6BY1|1|CA|A|182
6BY1|1|CA|C|183
*
6BY1|1|CA|G|214
6BY1|1|CA|G|215
6BY1|1|CA|A|216
6BY1|1|CA|A|217
6BY1|1|CA|A|218
6BY1|1|CA|A|219
6BY1|1|CA|G|220
6BY1|1|CA|A|221
6BY1|1|CA|A|222
6BY1|1|CA|A|223
6BY1|1|CA|U|224
*
6BY1|1|CA|A|231
6BY1|1|CA|G|232
6BY1|1|CA|A|233
6BY1|1|CA|U|234
6BY1|1|CA|U|235
6BY1|1|CA|C|236
*
6BY1|1|CA|G|261
6BY1|1|CA|A|262
6BY1|1|CA|G|263
6BY1|1|CA|C|264
6BY1|1|CA|A|265
6BY1|1|CA|G|266
*
6BY1|1|CA|C|426
6BY1|1|CA|U|427
6BY1|1|CA|A|428
6BY1|1|CA|A|429
6BY1|1|CA|A|430
6BY1|1|CA|U|431
6BY1|1|CA|A|432
6BY1|1|CA|C|433

Current chains

Chain CA

23S ribosomal RNA

Nearby chains

Chain C3

50S ribosomal protein L34