J6_6DNC_001
3D structure
- PDB id
- 6DNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 6DNC|1|B|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6DNC|1|B|G|45
6DNC|1|B|G|46
*
6DNC|1|B|C|179
6DNC|1|B|G|180
6DNC|1|B|A|181
6DNC|1|B|A|182
6DNC|1|B|C|183
*
6DNC|1|B|G|214
6DNC|1|B|G|215
6DNC|1|B|A|216
6DNC|1|B|A|217
6DNC|1|B|A|218
6DNC|1|B|A|219
6DNC|1|B|G|220
6DNC|1|B|A|221
6DNC|1|B|A|222
6DNC|1|B|A|223
6DNC|1|B|U|224
*
6DNC|1|B|A|231
6DNC|1|B|G|232
6DNC|1|B|A|233
6DNC|1|B|U|234
6DNC|1|B|U|235
*
6DNC|1|B|A|262
6DNC|1|B|G|263
6DNC|1|B|C|264
6DNC|1|B|A|265
6DNC|1|B|G|266
*
6DNC|1|B|C|426
6DNC|1|B|U|427
6DNC|1|B|A|428
6DNC|1|B|A|429
6DNC|1|B|A|430
6DNC|1|B|U|431
6DNC|1|B|A|432
6DNC|1|B|C|433
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain HA
- 50S ribosomal protein L34
Coloring options: