J6_6ENF_001

3D structure

PDB id

6ENF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

6ENF|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ENF|1|A|G|45
6ENF|1|A|G|46
*
6ENF|1|A|C|179
6ENF|1|A|G|180
6ENF|1|A|A|181
6ENF|1|A|A|182
6ENF|1|A|C|183
*
6ENF|1|A|G|214
6ENF|1|A|G|215
6ENF|1|A|A|216
6ENF|1|A|A|217
6ENF|1|A|A|218
6ENF|1|A|A|219
6ENF|1|A|G|220
6ENF|1|A|A|221
6ENF|1|A|A|222
6ENF|1|A|A|223
6ENF|1|A|U|224
*
6ENF|1|A|A|231
6ENF|1|A|G|232
6ENF|1|A|A|233
6ENF|1|A|U|234
6ENF|1|A|U|235
*
6ENF|1|A|A|262
6ENF|1|A|G|263
6ENF|1|A|C|264
6ENF|1|A|A|265
6ENF|1|A|G|266
*
6ENF|1|A|C|426
6ENF|1|A|U|427
6ENF|1|A|A|428
6ENF|1|A|A|429
6ENF|1|A|A|430
6ENF|1|A|U|431
6ENF|1|A|A|432
6ENF|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34