J6_6FTG_001
3D structure
- PDB id
- 6FTG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
Loop
- Sequence
- GGCGAC*GGAGAAGAAAC*GGAUU*AAGAG*CUAAAUAC*GUC
- Length
- 38 nucleotides
- Bulged bases
- 6FTG|1|u|A|66, 6FTG|1|w|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FTG|1|u|G|21
6FTG|1|u|G|22
6FTG|1|u|C|23
6FTG|1|u|G|24
6FTG|1|u|A|25
6FTG|1|u|C|26
*
6FTG|1|u|G|57
6FTG|1|u|G|58
6FTG|1|u|A|59
6FTG|1|u|G|60
6FTG|1|u|A|61
6FTG|1|u|A|62
6FTG|1|u|G|63
6FTG|1|u|A|64
6FTG|1|u|A|65
6FTG|1|u|A|66
6FTG|1|u|C|67
*
6FTG|1|u|G|74
6FTG|1|u|G|75
6FTG|1|u|A|76
6FTG|1|u|U|77
6FTG|1|u|U|78
*
6FTG|1|u|A|105
6FTG|1|u|A|106
6FTG|1|u|G|107
6FTG|1|u|A|108
6FTG|1|u|G|109
*
6FTG|1|u|C|332
6FTG|1|u|U|333
6FTG|1|u|A|334
6FTG|1|u|A|335
6FTG|1|u|A|336
6FTG|1|u|U|337
6FTG|1|u|A|338
6FTG|1|u|C|339
*
6FTG|1|w|G|33
6FTG|1|w|U|34
6FTG|1|w|C|35
Current chains
- Chain u
- 28S ribosomal RNA
- Chain w
- 5.8S ribosomal RNA
Nearby chains
- Chain L
- eL13
- Chain N
- Ribosomal protein L15
- Chain h
- eL29
- Chain i
- 60S ribosomal protein L36
- Chain j
- Ribosomal protein L37
Coloring options: