J6_6H58_001

3D structure

PDB id

6H58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

6H58|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6H58|1|A|G|45
6H58|1|A|G|46
*
6H58|1|A|C|179
6H58|1|A|G|180
6H58|1|A|A|181
6H58|1|A|A|182
6H58|1|A|C|183
*
6H58|1|A|G|214
6H58|1|A|G|215
6H58|1|A|A|216
6H58|1|A|A|217
6H58|1|A|A|218
6H58|1|A|A|219
6H58|1|A|G|220
6H58|1|A|A|221
6H58|1|A|A|222
6H58|1|A|A|223
6H58|1|A|U|224
*
6H58|1|A|A|231
6H58|1|A|G|232
6H58|1|A|A|233
6H58|1|A|U|234
6H58|1|A|U|235
*
6H58|1|A|A|262
6H58|1|A|G|263
6H58|1|A|C|264
6H58|1|A|A|265
6H58|1|A|G|266
*
6H58|1|A|C|426
6H58|1|A|U|427
6H58|1|A|A|428
6H58|1|A|A|429
6H58|1|A|A|430
6H58|1|A|U|431
6H58|1|A|A|432
6H58|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34