J6_6HTQ_002
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- UUUACUGC*GCAGUUUGAC*GUCG*CGCC*GCUUAGUGAUCC*GCUCAACGGAUAAAA
- Length
- 53 nucleotides
- Bulged bases
- 6HTQ|1|A|U|2105, 6HTQ|1|A|A|2417, 6HTQ|1|A|U|2419, 6HTQ|1|A|G|2457, 6HTQ|1|A|A|2459, 6HTQ|1|A|U|2460
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HTQ|1|A|U|2103
6HTQ|1|A|U|2104
6HTQ|1|A|U|2105
6HTQ|1|A|A|2106
6HTQ|1|A|C|2107
6HTQ|1|A|U|2108
6HTQ|1|A|G|2109
6HTQ|1|A|C|2110
*
6HTQ|1|A|G|2268
6HTQ|1|A|C|2269
6HTQ|1|A|A|2270
6HTQ|1|A|G|2271
6HTQ|1|A|U|2272
6HTQ|1|A|U|2273
6HTQ|1|A|U|2274
6HTQ|1|A|G|2275
6HTQ|1|A|A|2276
6HTQ|1|A|C|2277
*
6HTQ|1|A|G|2285
6HTQ|1|A|U|2286
6HTQ|1|A|C|2287
6HTQ|1|A|G|2288
*
6HTQ|1|A|C|2310
6HTQ|1|A|G|2311
6HTQ|1|A|C|2312
6HTQ|1|A|C|2313
*
6HTQ|1|A|G|2413
6HTQ|1|A|C|2414
6HTQ|1|A|U|2415
6HTQ|1|A|U|2416
6HTQ|1|A|A|2417
6HTQ|1|A|G|2418
6HTQ|1|A|U|2419
6HTQ|1|A|G|2420
6HTQ|1|A|A|2421
6HTQ|1|A|U|2422
6HTQ|1|A|C|2423
6HTQ|1|A|C|2424
*
6HTQ|1|A|G|2450
6HTQ|1|A|C|2451
6HTQ|1|A|U|2452
6HTQ|1|A|C|2453
6HTQ|1|A|A|2454
6HTQ|1|A|A|2455
6HTQ|1|A|C|2456
6HTQ|1|A|G|2457
6HTQ|1|A|G|2458
6HTQ|1|A|A|2459
6HTQ|1|A|U|2460
6HTQ|1|A|A|2461
6HTQ|1|A|A|2462
6HTQ|1|A|A|2463
6HTQ|1|A|A|2464
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L33 1
- Chain 4
- 50S ribosomal protein L35
- Chain C
- 50S ribosomal protein L2
- Chain L
- 50S ribosomal protein L15
- Chain V
- 50S ribosomal protein L27
- Chain W
- 50S ribosomal protein L28
- Chain v
- Transfer RNA; tRNA
- Chain w
- Transfer RNA; tRNA
Coloring options: