J6_6LKQ_001
3D structure
- PDB id
- 6LKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 6LKQ|1|t|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6LKQ|1|t|G|45
6LKQ|1|t|G|46
*
6LKQ|1|t|C|179
6LKQ|1|t|G|180
6LKQ|1|t|A|181
6LKQ|1|t|A|182
6LKQ|1|t|C|183
*
6LKQ|1|t|G|214
6LKQ|1|t|G|215
6LKQ|1|t|A|216
6LKQ|1|t|A|217
6LKQ|1|t|A|218
6LKQ|1|t|A|219
6LKQ|1|t|G|220
6LKQ|1|t|A|221
6LKQ|1|t|A|222
6LKQ|1|t|A|223
6LKQ|1|t|U|224
*
6LKQ|1|t|A|231
6LKQ|1|t|G|232
6LKQ|1|t|A|233
6LKQ|1|t|U|234
6LKQ|1|t|U|235
*
6LKQ|1|t|A|262
6LKQ|1|t|G|263
6LKQ|1|t|C|264
6LKQ|1|t|A|265
6LKQ|1|t|G|266
*
6LKQ|1|t|C|426
6LKQ|1|t|U|427
6LKQ|1|t|A|428
6LKQ|1|t|A|429
6LKQ|1|t|A|430
6LKQ|1|t|U|431
6LKQ|1|t|A|432
6LKQ|1|t|C|433
Current chains
- Chain t
- 23S ribosomal RNA
Nearby chains
- Chain k
- 50S ribosomal protein L34
Coloring options: