3D structure

PDB id
6NU2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
AGAUAG*CAAC*GUUAG*CACUA*UUGUAG*CACACCCAAU
Length
36 nucleotides
Bulged bases
6NU2|1|A|U|2030, 6NU2|1|A|A|2097, 6NU2|1|A|G|2140, 6NU2|1|A|A|2260, 6NU2|1|A|C|2261, 6NU2|1|A|C|2262
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6NU2|1|A|A|2027
6NU2|1|A|G|2028
6NU2|1|A|A|2029
6NU2|1|A|U|2030
6NU2|1|A|A|2031
6NU2|1|A|G|2032
*
6NU2|1|A|C|2043
6NU2|1|A|A|2044
6NU2|1|A|A|2045
6NU2|1|A|C|2046
*
6NU2|1|A|G|2094
6NU2|1|A|U|2095
6NU2|1|A|U|2096
6NU2|1|A|A|2097
6NU2|1|A|G|2098
*
6NU2|1|A|C|2123
6NU2|1|A|A|2124
6NU2|1|A|C|2125
6NU2|1|A|U|2126
6NU2|1|A|A|2127
*
6NU2|1|A|U|2138
6NU2|1|A|U|2139
6NU2|1|A|G|2140
6NU2|1|A|U|2141
6NU2|1|A|A|2142
6NU2|1|A|G|2143
*
6NU2|1|A|C|2257
6NU2|1|A|A|2258
6NU2|1|A|C|2259
6NU2|1|A|A|2260
6NU2|1|A|C|2261
6NU2|1|A|C|2262
6NU2|1|A|C|2263
6NU2|1|A|A|2264
6NU2|1|A|A|2265
6NU2|1|A|U|2266

Current chains

Chain A
16S rRNA

Nearby chains

Chain 3
39S ribosomal protein L35, mitochondrial
Chain I
39S ribosomal protein L10, mitochondrial
Chain M
39S ribosomal protein L15, mitochondrial
Chain N
39S ribosomal protein L16, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain S
39S ribosomal protein L21, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain Z
39S ribosomal protein L30, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial
Chain j
39S ribosomal protein L52, mitochondrial
Chain o
Ribosomal protein 63, mitochondrial

Coloring options:

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