3D structure

PDB id
6NU3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
AGAUAG*CAA*UUAG*CACUA*UUGUAG*CACACCCAAU
Length
34 nucleotides
Bulged bases
6NU3|1|A|U|2096, 6NU3|1|A|A|2097, 6NU3|1|A|G|2140, 6NU3|1|A|A|2260, 6NU3|1|A|C|2261, 6NU3|1|A|C|2262
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6NU3|1|A|A|2027
6NU3|1|A|G|2028
6NU3|1|A|A|2029
6NU3|1|A|U|2030
6NU3|1|A|A|2031
6NU3|1|A|G|2032
*
6NU3|1|A|C|2043
6NU3|1|A|A|2044
6NU3|1|A|A|2045
*
6NU3|1|A|U|2095
6NU3|1|A|U|2096
6NU3|1|A|A|2097
6NU3|1|A|G|2098
*
6NU3|1|A|C|2123
6NU3|1|A|A|2124
6NU3|1|A|C|2125
6NU3|1|A|U|2126
6NU3|1|A|A|2127
*
6NU3|1|A|U|2138
6NU3|1|A|U|2139
6NU3|1|A|G|2140
6NU3|1|A|U|2141
6NU3|1|A|A|2142
6NU3|1|A|G|2143
*
6NU3|1|A|C|2257
6NU3|1|A|A|2258
6NU3|1|A|C|2259
6NU3|1|A|A|2260
6NU3|1|A|C|2261
6NU3|1|A|C|2262
6NU3|1|A|C|2263
6NU3|1|A|A|2264
6NU3|1|A|A|2265
6NU3|1|A|U|2266

Current chains

Chain A
16S rRNA

Nearby chains

Chain 3
39S ribosomal protein L35, mitochondrial
Chain I
39S ribosomal protein L10, mitochondrial
Chain M
39S ribosomal protein L15, mitochondrial
Chain N
39S ribosomal protein L16, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain S
39S ribosomal protein L21, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain Z
39S ribosomal protein L30, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial
Chain j
39S ribosomal protein L52, mitochondrial
Chain o
Ribosomal protein 63, mitochondrial

Coloring options:

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