J6_6Q95_001
3D structure
- PDB id
- 6Q95 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of T. thermophilus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC
- Length
- 36 nucleotides
- Bulged bases
- 6Q95|1|1|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q95|1|1|G|44
6Q95|1|1|C|45
*
6Q95|1|1|G|179
6Q95|1|1|G|180
6Q95|1|1|A|181
6Q95|1|1|A|182
6Q95|1|1|C|183
*
6Q95|1|1|G|214
6Q95|1|1|G|215
6Q95|1|1|A|216
6Q95|1|1|G|217
6Q95|1|1|A|218
6Q95|1|1|G|219
6Q95|1|1|G|220
6Q95|1|1|A|221
6Q95|1|1|A|222
6Q95|1|1|A|223
6Q95|1|1|G|224
*
6Q95|1|1|C|231
6Q95|1|1|G|232
6Q95|1|1|A|233
6Q95|1|1|C|234
6Q95|1|1|U|235
*
6Q95|1|1|A|262
6Q95|1|1|C|263
6Q95|1|1|C|264
6Q95|1|1|A|265
6Q95|1|1|G|266
*
6Q95|1|1|C|426
6Q95|1|1|U|427
6Q95|1|1|A|428
6Q95|1|1|A|429
6Q95|1|1|G|430
6Q95|1|1|U|431
6Q95|1|1|A|432
6Q95|1|1|C|433
Current chains
- Chain 1
- 23S RIBOSOMAL RNA
Nearby chains
- Chain d
- 50S ribosomal protein L34
Coloring options: