J6_6W6L_001
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- GUC*GGCGAC*GGAAAAGAAAC*GGAUU*AAGAG*CUAAAUAC
- Length
- 38 nucleotides
- Bulged bases
- 6W6L|1|D|U|34, 6W6L|1|t|A|66
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6W6L|1|D|G|33
6W6L|1|D|U|34
6W6L|1|D|C|35
*
6W6L|1|t|G|21
6W6L|1|t|G|22
6W6L|1|t|C|23
6W6L|1|t|G|24
6W6L|1|t|A|25
6W6L|1|t|C|26
*
6W6L|1|t|G|57
6W6L|1|t|G|58
6W6L|1|t|A|59
6W6L|1|t|A|60
6W6L|1|t|A|61
6W6L|1|t|A|62
6W6L|1|t|G|63
6W6L|1|t|A|64
6W6L|1|t|A|65
6W6L|1|t|A|66
6W6L|1|t|C|67
*
6W6L|1|t|G|74
6W6L|1|t|G|75
6W6L|1|t|A|76
6W6L|1|t|U|77
6W6L|1|t|U|78
*
6W6L|1|t|A|105
6W6L|1|t|A|106
6W6L|1|t|G|107
6W6L|1|t|A|108
6W6L|1|t|G|109
*
6W6L|1|t|C|326
6W6L|1|t|U|327
6W6L|1|t|A|328
6W6L|1|t|A|329
6W6L|1|t|A|330
6W6L|1|t|U|331
6W6L|1|t|A|332
6W6L|1|t|C|333
Current chains
- Chain D
- 5.8S ribosomal RNA
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain M
- 60S ribosomal protein L13
- Chain O
- 60S ribosomal protein L15
- Chain i
- 60S ribosomal protein L35
- Chain j
- 60S ribosomal protein L36
- Chain k
- 60S ribosomal protein L37
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