J6_6XA1_002
3D structure
- PDB id
- 6XA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a drug-like compound stalled human translation termination complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG
- Length
- 27 nucleotides
- Bulged bases
- 6XA1|1|L5|C|1488, 6XA1|1|L5|G|1489
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XA1|1|L5|C|1339
6XA1|1|L5|G|1340
6XA1|1|L5|A|1341
6XA1|1|L5|G|1342
*
6XA1|1|L5|C|1371
6XA1|1|L5|G|1372
6XA1|1|L5|C|1373
6XA1|1|L5|A|1374
6XA1|1|L5|A|1375
*
6XA1|1|L5|U|1382
6XA1|1|L5|G|1383
6XA1|1|L5|A|1384
6XA1|1|L5|A|1385
6XA1|1|L5|G|1386
*
6XA1|1|L5|C|1405
6XA1|1|L5|G|1406
6XA1|1|L5|A|1407
6XA1|1|L5|G|1408
*
6XA1|1|L5|C|1451
6XA1|1|L5|G|1452
6XA1|1|L5|G|1453
*
6XA1|1|L5|C|1486
6XA1|1|L5|A|1487
6XA1|1|L5|C|1488
6XA1|1|L5|G|1489
6XA1|1|L5|A|1490
6XA1|1|L5|G|1491
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
- Chain LL
- 60S ribosomal protein L13
- Chain LQ
- 60S ribosomal protein L18
- Chain La
- 60S ribosomal protein L27a
- Chain Lb
- 60S ribosomal protein L29
- Chain Li
- 60S ribosomal protein L36
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