J6_7AQD_001
3D structure
- PDB id
- 7AQD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the bacterial RQC complex (Translocating State)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GC*GCAGAC*GGAAGAGAAAG*CGAUU*AUCAG*CUAAAUAC
- Length
- 37 nucleotides
- Bulged bases
- 7AQD|1|A|G|184, 7AQD|1|A|A|226, 7AQD|1|A|C|267
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7AQD|1|A|G|45
7AQD|1|A|C|46
*
7AQD|1|A|G|181
7AQD|1|A|C|182
7AQD|1|A|A|183
7AQD|1|A|G|184
7AQD|1|A|A|185
7AQD|1|A|C|186
*
7AQD|1|A|G|217
7AQD|1|A|G|218
7AQD|1|A|A|219
7AQD|1|A|A|220
7AQD|1|A|G|221
7AQD|1|A|A|222
7AQD|1|A|G|223
7AQD|1|A|A|224
7AQD|1|A|A|225
7AQD|1|A|A|226
7AQD|1|A|G|227
*
7AQD|1|A|C|234
7AQD|1|A|G|235
7AQD|1|A|A|236
7AQD|1|A|U|237
7AQD|1|A|U|238
*
7AQD|1|A|A|265
7AQD|1|A|U|266
7AQD|1|A|C|267
7AQD|1|A|A|268
7AQD|1|A|G|269
*
7AQD|1|A|C|473
7AQD|1|A|U|474
7AQD|1|A|A|475
7AQD|1|A|A|476
7AQD|1|A|A|477
7AQD|1|A|U|478
7AQD|1|A|A|479
7AQD|1|A|C|480
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain d
- 50S ribosomal protein L34
Coloring options: