J6_7AQD_002
3D structure
- PDB id
- 7AQD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the bacterial RQC complex (Translocating State)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCC*GCUUAGUGAUCC*GCUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 7AQD|1|A|U|2105, 7AQD|1|A|U|2419, 7AQD|1|A|G|2457, 7AQD|1|A|A|2459, 7AQD|1|A|U|2460, 7AQD|1|A|A|2463
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7AQD|1|A|U|2103
7AQD|1|A|U|2104
7AQD|1|A|U|2105
7AQD|1|A|A|2106
*
7AQD|1|A|U|2272
7AQD|1|A|U|2273
7AQD|1|A|U|2274
7AQD|1|A|G|2275
*
7AQD|1|A|C|2287
7AQD|1|A|G|2288
*
7AQD|1|A|C|2310
7AQD|1|A|G|2311
7AQD|1|A|C|2312
7AQD|1|A|C|2313
*
7AQD|1|A|G|2413
7AQD|1|A|C|2414
7AQD|1|A|U|2415
7AQD|1|A|U|2416
7AQD|1|A|A|2417
7AQD|1|A|G|2418
7AQD|1|A|U|2419
7AQD|1|A|G|2420
7AQD|1|A|A|2421
7AQD|1|A|U|2422
7AQD|1|A|C|2423
7AQD|1|A|C|2424
*
7AQD|1|A|G|2450
7AQD|1|A|C|2451
7AQD|1|A|U|2452
7AQD|1|A|C|2453
7AQD|1|A|A|2454
7AQD|1|A|A|2455
7AQD|1|A|C|2456
7AQD|1|A|G|2457
7AQD|1|A|G|2458
7AQD|1|A|A|2459
7AQD|1|A|U|2460
7AQD|1|A|A|2461
7AQD|1|A|A|2462
7AQD|1|A|A|2463
7AQD|1|A|A|2464
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain L
- 50S ribosomal protein L15
- Chain V
- 50S ribosomal protein L27
- Chain X
- 50S ribosomal protein L28
- Chain c
- 50S ribosomal protein L33 1
- Chain e
- 50S ribosomal protein L35
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