3D structure

PDB id
7JT3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
Length
36 nucleotides
Bulged bases
7JT3|1|1|A|223
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7JT3|1|1|G|45
7JT3|1|1|G|46
*
7JT3|1|1|C|179
7JT3|1|1|G|180
7JT3|1|1|A|181
7JT3|1|1|A|182
7JT3|1|1|C|183
*
7JT3|1|1|G|214
7JT3|1|1|G|215
7JT3|1|1|A|216
7JT3|1|1|A|217
7JT3|1|1|A|218
7JT3|1|1|A|219
7JT3|1|1|G|220
7JT3|1|1|A|221
7JT3|1|1|A|222
7JT3|1|1|A|223
7JT3|1|1|U|224
*
7JT3|1|1|A|231
7JT3|1|1|G|232
7JT3|1|1|A|233
7JT3|1|1|U|234
7JT3|1|1|U|235
*
7JT3|1|1|A|262
7JT3|1|1|G|263
7JT3|1|1|C|264
7JT3|1|1|A|265
7JT3|1|1|G|266
*
7JT3|1|1|C|426
7JT3|1|1|U|427
7JT3|1|1|A|428
7JT3|1|1|A|429
7JT3|1|1|A|430
7JT3|1|1|U|431
7JT3|1|1|A|432
7JT3|1|1|C|433

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain D
50S ribosomal protein L34

Coloring options:

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